Package: scCATCH
Type: Package
Title: Single Cell Cluster-Based Annotation Toolkit for Cellular
        Heterogeneity
Version: 3.2.2
Depends: R (>= 4.0.0)
Author: Xin Shao
Maintainer: Xin Shao<xin_shao@zju.edu.cn>
Description: An automatic cluster-based annotation pipeline based on
        evidence-based score by matching the marker genes with known
        cell markers in tissue-specific cell taxonomy reference
        database for single-cell RNA-seq data. See Shao X, et al (2020)
        <doi:10.1016/j.isci.2020.100882> for more details.
URL: https://github.com/ZJUFanLab/scCATCH
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.2
Suggests: rmarkdown, knitr, testthat, prettydoc
VignetteBuilder: knitr
Imports: Matrix, methods, progress, stats, reshape2
Config/pak/sysreqs: libicu-dev
Repository: https://zjufanlab.r-universe.dev
Date/Publication: 2023-05-08 06:22:36 UTC
RemoteUrl: https://github.com/zjufanlab/sccatch
RemoteRef: HEAD
RemoteSha: 06c6ffb960795d028c675643f0d22fbc78080a97
NeedsCompilation: no
Packaged: 2026-06-08 08:49:24 UTC; root